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Make the following selections or Enter ChromDB IDs and locus numbers

1. Select organisms (hold Ctl to select multiple) (or Select Taxon)

All Acorus americanus Aedes aegypti Aegilops speltoides Agapanthus praecox Ajellomyces capsulatus NAm1 Allium cepa Allium sativum Amborella trichopoda Anopheles gambiae str. PEST Antirrhinum majus Apis mellifera Apium graveolens Aquilegia alpina Aquilegia coerulea Aquilegia formosa x Aquilegia pubescens Arabidopsis lyrata Arabidopsis thaliana Arachis hypogaea Aranda deborah Ascobolus immersus Ashbya gossypii ATCC 10895 Asparagus officinalis Asparagus virgatus Aspergillus clavatus NRRL 1 Aspergillus flavus NRRL3357 Aspergillus fumigatus Aspergillus nidulans FGSC A4 Aspergillus niger CBS 513.88 Aspergillus oryzae RIB40 Aspergillus terreus NIH2624 Avena sativa Batrachochytrium dendrobatidis JEL423 Beta vulgaris Bos taurus Botryotinia fuckeliana B05.10 Brachypodium distachyon Brassica napus Brassica oleracea Caenorhabditis elegans Callitropsis nootkatensis Canavalia gladiata Candida albicans Candida glabrata CBS 138 Candida lusitaniae ATCC 42720 Candida tropicalis MYA-3404 Canis familiaris Capitella sp.1 Capsella rubella Capsicum annuum Carica papaya Castanea mollissima Ceratopteris richardii Chaetomium globosum CBS 148.51 Chlamydomonas reinhardtii Cicer arietinum Ciona intestinalis Citrus clementina Citrus sinensis Coccidioides immitis RS Coccidioides posadasii RMSCC 3488 Coffea arabica Coffea canephora Coprinus cinereus okayama7#130 Cryptococcus neoformans var. neoformans JEC21 Cryptosporidium parvum Cucumis sativus Cyanidioschyzon merolae strain 10D Cycas rumphii Danio rerio Daucus carota Debaryomyces hansenii CBS767 Dendrobium grex Madame Thong-In Dictyostelium discoideum AX4 Dictyostelium purpureum Drosophila melanogaster Drosophila pseudoobscura pseudoobscura Ectocarpus siliculosus Elaeis guineensis Emiliania huxleyi CCMP1516 Equus caballus Eschscholzia californica Eucalyptus globulus subsp. globulus Eucalyptus grandis Eucalyptus occidentalis Euphorbia esula Eutrema halophilum Festuca pratensis Fragaria x ananassa Fritillaria agrestis Fritillaria liliacea Fusarium oxysporum f. sp. lycopersici Gallus gallus Gerbera hybrid cultivar Gibberella moniliformis 7600 Gibberella zeae PH-1 Glycine max Glycine soja Gnetum gnemon Gossypium arboreum Gossypium hirsutum Helianthus annuus Homo sapiens Hordeum vulgare Hyacinthus orientalis Ipomoea batatas Ipomoea nil Ipomoea trifida Kluyveromyces lactis NRRL Y-1140 Laccaria bicolor Lactuca sativa Lactuca serriola Lathyrus aphaca Lathyrus sativus Lens culinaris Lilium longiflorum Linum usitatissimum Liriodendron tulipifera Lodderomyces elongisporus NRRL YB-4239 Lolium multiflorum Lolium perenne Lolium temulentum Lotus japonicus Lupinus albus Lycopodium annotinum Macaca mulatta Magnaporthe oryzea 70-15 Magnolia praecocissima Malus x domestica Manihot esculenta Medicago sativa Medicago truncatula Mesembryanthemum crystallinum Micromonas pusilla CCMP1545 Micromonas pusilla NOUM17 Mimulus guttatus Monodelphis domestica Monosiga brevicollis Mus musculus Musa acuminata Musa balbisiana Nectria haematococca Neurospora crassa OR74A Nicotiana benthamiana Nicotiana tabacum Ornithorhynchus anatinus Oryza sativa (indica cultivar-group) Oryza sativa ssp. japonica Ostreococcus lucimarinus Ostreococcus sp. RCC809 Ostreococcus tauri Pan troglodytes Panicum virgatum Paracoccidioides brasiliensis Pb01 Paulownia kawakamii Penicillium chrysogenum Wisconsin 54-1255 Petroselinum crispum Petunia hybrida Phaeodactylum tricornutum Phanerochaete chrysosporium Phaseolus coccineus Physcomitrella patens Phytophthora ramorum Phytophthora sojae Picea abies Picea glauca Picea sitchensis Pichia guilliermondii ATCC 6260 Pichia stipitis CBS 6054 Pimpinella brachycarpa Pinus pinaster Pinus radiata Pinus taeda Pisum fulvum Pisum sativum Plasmodium falciparum Poncirus trifoliata Populus trichocarpa Prunus persica Puccinia graminis f. sp. tritici CRL 75-36-700-3 Rattus norvegicus Ricinus communis Saccharomyces cerevisiae Saccharomyces mikatae IFO 1815 Saccharomyces paradoxus NRRL Y-17217 Saccharum officinarum Schizosaccharomyces japonicus yFS275 Schizosaccharomyces pombe 972h- Secale cereale Selaginella moellendorffii Setaria italica Silene diclinis Sinapis alba Solanum chilense Solanum habrochaites Sorghum bicolor Sorghum propinquum Sphagnum sp. JL-2005 Sporobolomyces roseus IAM 13481 Strongylocentrotus purpuratus Thalassiosira pseudonana CCMP1335 Theobroma cacao Tribolium castaneum Trichoplax adhaerens Triticum aestivum Triticum monococcum Ustilago maydis 521 Vicia species Vitis vinifera Volvox carteri f. nagariensis Xenopus tropicalis Yarrowia lipolytica CLIB122 Zea mays Zygosaccharomyces rouxii CBS 732

2. Select Protein Classification

All ABHF : Alpha_Beta Hydrolase Fold Super Family    Group V    Esterase_lipase Superfamily      Group I      Group III      Group IV      Group II AGO : Argonaute gene family ARID : ARID/BRIGHT DNA binding domain group    Plant Arid Group    Animal Arid Group      Tudor_RBB1NT Group      ARID2 group      ARID3 group      ARID5A_B group ARP : Actin superfamily; actin-related proteins    Arp4_7 Superclass      Fungal Arp4 and 7 Groups      Plant and Animal ARP4 Class      Plant ARP7 Group    Arp1_2_3 Superclass      ARP2 Class      ARP3 Class      ARP1 Class    ARP5_6/AtARP8 Superclass      ARP5 Class      ARP6 Class      Plant ARP8 Class    ScARP8_9/AtARP9 Superclass      Fungal Specific Class      Sc ARP9 Class      Sc ARP8/At ARP9 Class BRAT : Bromodomain-containing proteins containing AAA ATPase domains BRD : Diverse bromodomain-containing proteins (polybromo1, yeast RSC, and human BRD homologs)    HsBRD8, BAZ1B group    yeast RSC group      RSC1/2 group (+ BAH domain)      RSC4 group (- BAH domain)    plant specific      with myb_DNA-binding domain      Impacted by sequence quality      no myb_DNA-binding domain    single domain group      HsBRD1, BRRF1, BRPF3 group      HsBRD7 and 9 group      Plant Bromodomain Group        Monocot specific group_BRD101        Monocot specific group_BRD102        AtBRD1 Group        BRD918 Group        AtBRD13 Group    HsFALZ, TRIM24, TRIM33 groups      HsFALZ group      HsSP140, TRIM24, TRIM33 group      HsZYMD11, PRKCBP1 group    SPT7 group    animal polybromo1 group BRWD : Bromodomain-containing proteins containing WD40 domain repeats CDPK : Cyclin-dependent protein kinase CHB : SWI/SNF and RSC chromatin remodeling complex proteins (Swi3 and Rsc8 homologs)    ARATH SWI3D Group    SWI3_RSC8 Group      SACCE_Rsc8 Group      Animal Swi3/Rsc8 homologs      SACCE_Swi3 Group      Fungal Swi3/Rsc8 Homologs    ARATH SWI3A Group    ARATH SWI3C Group    ARATH SWI3B Group CHC : SWI/SNF and RSC chromatin remodeling complex proteins (Swp73 and Rsc6 homologs)    Fungal ScUAF Group    SMARD/SWP73/RSC6 group CHE : SWI/SNF chromatin remodeling complex proteins (Snf5 homologs)    SNF5_animals    Fungal Snf5 Homologs    SNF5_plants    Fungal SFH1 Homologs CHR : SNF2 super family (Snf2, Ris1, Rad26 superclasses)    RIS1 Superclass      RAD5 class        ARATH_32 Group        ARATH_29 Group      Fungal specific clade      RIS1 class        Sc_RIS Group        Filamentous fungi group        Ris_odds        CHR27_CHR28 Group        CHR30_CHR33 Group      CHR36/39 class        CHR39 class        CHR36 class        DNA_methylase      RAD16 class      SMARCA3 class      Lodestar class    RAD26 Superclass      DRD1 class        CHR31 group        DRD subclass        CHR38 group      HARP class        ARATH_18 Group        ARATH_14 Group      RAD54 class        Group C3a        Group C3b      RAD26 class        RAD26-like subclass        CHR24 subclass        RAD26 subclass      ATRX class    SNF2 Superclass      ISWI class      CHD class        CHD1 subclass        HOMSA_CHDL and ARATH_CHR10 sublcass        Mi2 subclass          Animal Mi-2 Subgroup          Monocot chromodomain group          Fungal group; similarity to animal Mi-2 subgroup          CHR4 Group          PKL Group        Kismet subclass      MOM group      TafII170/MOT class      SNF2 class        Plant SNF2 homologs        Animal Brahma Group        Plant ARATH SYD Group        Algal Snf2 Group        Plant ARATH UBC6 Group        Yeast Sth1 Group        Stramenopile Snf2 Group        Yeast Snf2 Group        Fungal Snf2/Sth1 Group      SNF2 odds      DDM/LSH class      FSI class        SWR1 subclass        INO80 subclass        FUN30/ETL subclass CONS : Flowering control-associated proteins; CONSTANS group CPC : Condensin complex component; SMC protein group CPD : Condensin complex component, non-SMC subunit (Cnd1 homologs) CPG : Condensin complex component, non-SMC subunit CPH : Condensin complex component; Barren domain-containing, non-SMC subunit CPuORF : Conserved Peptide Upstream Open Reading Frame (CPuORF) Transcripts    MOAJ : CPuORF HG10; mORF: MAP kinase, PPC family 4.5.1    MOAR : CPuORF HG18; mORF: HSF-like transcription factor TBF1/HsfB1    MOAS : CPuORF HG19; mORF: Histidine-rich protein HIRP1    MOAT : CPuORF HG20; mORF: Unknown protein    MOAU : CPuORF HG21; mORF: ERF/CRF-type AP2 transcription factor    MOAV : CPuORF HG22; mORF: Ubiquitin-specific protease family, C19-related    MOAW : CPuORF HG23; mORF: MAP kinase, PPC family 4.1.5, WNK8/10 subfamily    MOAX : CPuORF HG24; mORF: PD-(D/E)XK nuclease    MOAY : CPuORF HG25; mORF: GRIK/SNAK calcium response protein kinases    MOAZ : CPuORF HG26; mORF: RING finger protein, E3 ubiquitin ligase      MOBC : CPuORF HG29; mORF: Dicarboxylate carrier protein      MOBD : CPuORF HG27; mORF: CBL-interacting protein kinase, CIPK6 subfamily      MOBB : CPuORF HG30; mORF: Adenylate cyclase    MOAP : CPuORF HG16; mORF: MAP kinase, PPC family 4.1.5, WNK5 subfamily    MOAO : CPuORF HG15; mORF: bHLH transcription factors, SAC51 subfamily    MOAA : CPuORF HG1; mORF: S1-group bZIP transcriptiion factor    MOAB : CPuORF HG2; mORF: bHLH transcription factor, LHW subfamily    MOAC : CPuORF HG3; mORF: S-adenosylmethionine decarboxylase    MOAD : CPuORF HG4; mORF: MADS-box, MIKC-C type, transcription factor    MOAE : CPuORF HG5; mORF: Ankyrin repeats protein    MOAG : CPuORF HG7; mORF: Translation initiation factor eIF5    MOAF : CPuORF HG6; mORF: Polyamine oxidase    MOAH : CPuORF HG8; mORF: TGF-beta superfamily; Mic-1 (GDF15) putative ortholog    MOAI : CPuORF HG9; mORF: Cysteine-rich protein    MOAL : CPuORF HG12; mORF = unknown protein    MOAM : CPuORF HG13; mORF: Phosphoethanolamine N-methyltransferase    MOAN : CPuORF HG14; mORF: HDZip class I transcription factors      MOBA : CPuORF HG28; F-box/kelch-repeat protein CRD : Diverse group of chromodomain-containing proteins CYCA : Cyclin family protein group A DCL : Dicer-Like group    ARATH_DCL3 Group DKSB : DEK_C N Terminal Domain Proteins DMT : DNA methyltransferases    DNMT Class (CpG/CpnpG)      DNMT1 class (CpG)      Yeast Specific DMT      CMT1 class (CpNpG)    DNMT2 class (CpNpN;RNA-guided)    DRM class    DNMT3 class DNG : Superfamily of DNA glycosylases    Ros/Demeter Group DOTS : Nucleosomal histone H3-Lys79 methylase (Dot1 homologs) DRB : Double stranded RNA-Binding protein group DRSH : Animal-specific class II Ribonuclease III proteins (Drosho homologs) EBP : BAH-PHD domain-containing protein group ELF : Transcription Elongation Factor (Elf1 homologs) EPL : Enhancer of Polycomb-like protein group [E(Pc) homologs] ERI : Enhanced RNA interference FGP : Flowering control-associated proteins; FRIGIDA group FLCP : Flowering control-associated proteins FLT : Flowering control-associated proteins; FLT group FSHAT : Fungal-specific histone acetyltransferase GTA : Transcription elongation-nucleosome displacement proteins (Spt5 homologs) GTB : Transcription elongation-nucleosome displacement proteins (Spt6 homologs) GTC : Global transcription factor group C (Spt16 homologs) GTD : Global transcription factor group C (Spt3 homologs) GTE : Global transcription factor group E (Bdf1, BRD4 and BRD2 (RING3) homologs)    Animal, fungi    Plant Clades      Plant Clades 2      Plant Clades 3      Plant Clades 1 GTG : Transcription elongation-nucleosome displacement proteins (Spt4 homologs) GTI : Global transcription factor group I (Spt2 homologs) HAC : Histone acetyltransferases [CREBBP (CBP) family]    HAC2 Group HAF : TATA Box Binding Protein Associated Factors (TAF1 Homologs) HAG : Histone acetyltransferases (GNAT superfamily)    HAT1 Family    ELP3 Family      HPA2/HPA3 Subfamily      ELP3 Subfamily    GCN5 Family HAM : Histone acetyltransferases (MYST family)    ESA1    SAS2 group    SAS3 group    HAM1_2 group HCP : Sin3 complex components (SAP18 homologs) HDA : Histone deacetylases (Rpd3/HDA1 superfamily)    HDA14 Group    Class II RPD3 Family    Class III RPD3 Family    Class I RPD3 Family    Hos3 Group    HsHdac8 Group (HDA508)    HDA8 Group    HOS1 Group HDHD : Haloacid dehalogenase-like hydrolase domain-containing protein HDMA : Histone demethylases (AOF2/ LSD1 homologs)    ARATH_LDL1 Group    ARATH_LDL4 Group    ARATH_LDL2 Group    AOF2/ LSD1 homologs    ARATH_FLD Group HDT : Histone deacetylases (plant-specific HD2 family) HEN : HUA Enhancer HFO : Histone H4 HIRA : HIRA protein group HMGA : High Mobility Group Family A HMGB : High Mobility Group Family B    Structure-specific recognition protein    Arid Domain Group    Plant-specific, single HMG box domain Group HMTA : Set1 complex component (Ash2/Bre2 homologs) HON : Histone H1 linker protein    ARATH HON1 Group    ARATH HON3 Group HSC : Histone chaperone for Htz1p/H2A-H2B dimer HTA : Histone H2A Family    Histone Variants      MacroH2A histones      H2A variant    Core HTB : Histone H2B HTR : Histone H3 Family    Histone Variants    Core HUPA : Histone ubiquitination proteins group A (Bre1 homologs) HUPB : Histone ubiquitination proteins group B (Rad6 homologs) HXA : Histone acetyltransferase complex component (Ada2 homologs) HXB : Histone acetyltransferase complex component (Ada3 homologs) INGF : Inhibitor of Growth protein group (ING1-5 homologs) JMJ : Jumonji domain group    jmjN_jmjC Family      Plant Specific FYRN_FYRC Group      Jarid Group        Jarid2 Subgroup (transcription repressors)        Jarid1 Subgroup (H3K4 histone demethylases)      Plant Specific Zinc Finger        C2H2 zinc finger        C5HC2 zinc finger      Jmjd2 Group    jmjC Family      JmjD1 Group      JMJD4 Group      HSPB Group      Yeast ECM5 Family      PHF8 (plant homeodomain finger protein 8) Group      JHDM1 Group (H3K36 histone demethylases)      JMJD3 group KELP : KELP Protein Group LFY : Flowering control-associated proteins; LFY group MBD : Methyl binding domain proteins    ARATH MBD10_MBD11 Group    ARATH MBD1_MBD4 Group    Bromodomain group    HOMSA_BAZ2 Group    HOMSA MBD4 Group    MECP2 Group    ARATH MBD5_MBD6 Group    ARATH_MBD2 Group    HOMSA MBD5_MBD6 Group    Animal MBD1_MBD2_MBD3 Group      HOMSA MBD2_MBD3 Group      MBD1 Group MBTI : MADS-box Type I group MED10SUB : Mediator of RNA polymerase II transcription subunit 10 MED11SUB : Mediator of RNA polymerase II transcription subunit 11 MED12SUB : Mediator of RNA polymerase II transcription subunit 12 MED13SUB : Mediator of RNA polymerase II transcription subunit 13 MED14SUB : Mediator of RNA polymerase II transcription subunit 14 MED15SUB : Mediator of RNA polymerase II transcription subunit 15 MED16SUB : Mediator of RNA polymerase II transcription subunit 16 MED17SUB : Mediator of RNA polymerase II transcription subunit 17 MED18SUB : Mediator of RNA polymerase II transcription subunit 18 MED19SUB : Mediator of RNA polymerase II transcription subunit 19 MED1SUB : Mediator of RNA polymerase II transcription subunit 1 MED20SUB : Mediator of RNA polymerase II transcription subunit 20 MED21SUB : Mediator of RNA polymerase II transcription subunit 21 MED22SUB : Mediator of RNA polymerase II transcription subunit 22 MED23SUB : Mediator of RNA polymerase II transcription subunit 23 MED24SUB : Mediator of RNA polymerase II transcription subunit 24 MED25SUB : Mediator of RNA polymerase II transcription subunit 25 MED26SUB : Mediator of RNA polymerase II transcription subunit 26 MED27SUB : Mediator of RNA polymerase II transcription subunit 27 MED28SUB : Mediator of RNA polymerase II transcription subunit 28 MED29SUB : Mediator of RNA polymerase II transcription subunit 29 MED2SUB : Mediator of RNA polymerase II transcription subunit 2 MED30SUB : Mediator of RNA polymerase II transcription subunit 30 MED31SUB : Mediator of RNA polymerase II transcription subunit 31 MED3SUB : Mediator of RNA polymerase II transcription subunit 3 MED4SUB : Mediator of RNA polymerase II transcription subunit 4 MED5SUB : Mediator of RNA polymerase II transcription subunit 5 MED6SUB : Mediator of RNA polymerase II transcription subunit 6 MED7SUB : Mediator of RNA polymerase II transcription subunit 7 MED8SUB : Mediator of RNA polymerase II transcription subunit 8 MED9SUB : Mediator of RNA polymerase II transcription subunit 9    MOAA : CPuORF HG1; mORF: S1-group bZIP transcriptiion factor    MOAB : CPuORF HG2; mORF: bHLH transcription factor, LHW subfamily    MOAC : CPuORF HG3; mORF: S-adenosylmethionine decarboxylase    MOAD : CPuORF HG4; mORF: MADS-box, MIKC-C type, transcription factor    MOAE : CPuORF HG5; mORF: Ankyrin repeats protein    MOAF : CPuORF HG6; mORF: Polyamine oxidase    MOAG : CPuORF HG7; mORF: Translation initiation factor eIF5    MOAH : CPuORF HG8; mORF: TGF-beta superfamily; Mic-1 (GDF15) putative ortholog    MOAI : CPuORF HG9; mORF: Cysteine-rich protein    MOAJ : CPuORF HG10; mORF: MAP kinase, PPC family 4.5.1    MOAL : CPuORF HG12; mORF = unknown protein    MOAM : CPuORF HG13; mORF: Phosphoethanolamine N-methyltransferase    MOAN : CPuORF HG14; mORF: HDZip class I transcription factors    MOAO : CPuORF HG15; mORF: bHLH transcription factors, SAC51 subfamily    MOAP : CPuORF HG16; mORF: MAP kinase, PPC family 4.1.5, WNK5 subfamily    MOAR : CPuORF HG18; mORF: HSF-like transcription factor TBF1/HsfB1    MOAS : CPuORF HG19; mORF: Histidine-rich protein HIRP1    MOAT : CPuORF HG20; mORF: Unknown protein    MOAU : CPuORF HG21; mORF: ERF/CRF-type AP2 transcription factor    MOAV : CPuORF HG22; mORF: Ubiquitin-specific protease family, C19-related    MOAW : CPuORF HG23; mORF: MAP kinase, PPC family 4.1.5, WNK8/10 subfamily    MOAX : CPuORF HG24; mORF: PD-(D/E)XK nuclease    MOAY : CPuORF HG25; mORF: GRIK/SNAK calcium response protein kinases    MOAZ : CPuORF HG26; mORF: RING finger protein, E3 ubiquitin ligase      MOBA : CPuORF HG28; F-box/kelch-repeat protein      MOBB : CPuORF HG30; mORF: Adenylate cyclase      MOBC : CPuORF HG29; mORF: Dicarboxylate carrier protein      MOBD : CPuORF HG27; mORF: CBL-interacting protein kinase, CIPK6 subfamily MRG : MRG domain-containing proteins NFA : Nucleosome/chromatin assembly complex proteins (Nap1 homologs)    NAP1 Class    SET translocation (myeloid leukemia-associated) Cl NFB : Nucleosome/chromatin assembly complex proteins (Cac2 homologs) NFC : NURF complex component (RBBP4/Caf1 homologs)    Yeast MSI1    NFC4_5 group    NFC1_2_3 group NFE : Nucleosome positioning into regularly spaced arrays (Acf1 homologs) NFF : Nucleosome/chromatin assembly complex proteins (Cac1 homologs) NRPDA : RNA Polymerase IV Large Subunit NRPDB : RNA Polymerase IV Small Subunit PAFA : PAF1 complex protein (Paf1 homologs) PAFB : PAF1 complex protein (Leo1 homologs) PAFC : PAF1 complex protein (Ctr9 homologs) PAFD : PAF1 complex protein (Rtf1 homologs) PAFE : PAF1 complex protein (Cdc73 homologs) PATPA : Proteasomal ATPases; Group A PATPB : Proteasomal ATPases; Group B PGE : Polycomb group (esc homologs) PRMT : Protein arginine methyltransferases    PRMT3    PRMT6    PRMT1    PRMT5    CARM1    PRMT7 RDR : RNA-dependent RNA polymerases RHEL : RNA helicases RTTHC : Rtt106 histone chaperones RUVBL : eukaryotic homologs of the bacterial DNA-dependent ATPase and helicase RuvB    RVB2 like proteins    RVB1 like proteins SDG : SET domain proteins    SET Domain Protein Superclass A      KMT_H3K4        SETD7 Group        ARATH_ATX1 (SDG27) Group        ARATH_ATX4/5 Group        SET1 Group          ARATH_ATXR7 Group          SDG732 Group        TRR_TRX      KMT_H3K9 [Su(var)3-9]        Diverse Su(var)39 Group          ARATH_SUVR5 Group          HOMSA_SETD Group          HOMSA_EHMT Group (Ga9)          ARATH_SUVR3 Group          CLR4/SUV39H1 Group          ARATH_SUVR4 Group        CAEEL-specific SuVar39 Group        ARATH_SUVH Group          SUVH1/SUVH3 Group          ARATH_SUVH5/SUVH6 Group          ARATH_Kryptonite Group          ARATH_SUVH2/SUVH9 Group        Animal SETMAR group      KMT_H3K27 (Enhancer of zeste Group)        ARATH_EZA1 Group        ARATH_CLF Group        Fungal group; similarity to Enhancer of Zeste Proteins      KMT_H3K36 (SET2/SETD2/ASH) Group)        ASH1 Group        SET2 Group          SET2/SETD2 Subgroup          ARATH_EFS Group        NSD1        ARATH_ASHH1 Group      KMT_H4K20 (PR-Set7/8)    SET Domain Protein Superclass B      RuBisCO LSMT      ARATH_ATXR5 Group      SACCE_SET3 Group      S-ET interrupted and unclassified        SMYD Group        Suv420        S-ET interrupted        SET5      SACCE_SET7 Family SGA : Nucleosome assembly factor (ASF1 homologs) SGS : Suppressor of gene silencing SMH : Single myb histone protein group SNT : Histone deacetylase complex protein (Sin3 homologs) SRT : Histone deacetylases (SIR2 family)    Class III    Class II    Class IV    Class I      group 2      group 3      group 1 SSC : SAS4 protein group (yeast-specific) SSRP : Histone chaperone (Pob3 and SSRP homologs; FACT complex proteins) SWDA : COMPASS (Set1C) complex protein (SWD1 homologs) SWDB : COMPASS (Set1C) complex protein (SWD2 homologs)    SWDB2 Group    SWDB1 Group SWDC : COMPASS (Set1C) complex protein (SWD3 homologs)    SWDC2 Group    SWDC1 Group SWRCA : SWR complex proteins (SWC4 homlogs) TAFEI : TATA Box Binding Protein Associated Factors (TAF8 Homologs) TAFEL : TATA Box Binding Protein Associated Factors (TAF11 Homologs) TAFFF : TATA Box Binding Protein Associated Factors (TAF15 Homologs) TAFFN : TATA Box Binding Protein Associated Factors (TAF14 Homologs) TAFFO : TATA Box Binding Protein Associated Factors (TAF4 Homologs) TAFNI : TATA Box Binding Protein Associated Factors (TAF9 Homologs) TAFSV : TATA Box Binding Protein Associated Factors (TAF7 Homologs) TAFSX : TATA Box Binding Protein Associated Factors (TAF6 Homologs) TAFTE : TATA Box Binding Protein Associated Factors (TAF10 Homologs) TAFTH : TATA Box Binding Protein Associated Factors (TAF3 Homologs) TAFTN : TATA Box Binding Protein Associated Factors (TAF13 Homologs) TAFTV : TATA Box Binding Protein Associated Factors (TAF12Homologs) TAFTW : TATA Box Binding Protein Associated Factors (TAF2 Homologs) TAFV : TATA Box Binding Protein Associated Factors (TAF5 Homologs) TF2S : transcription elongation factor TFIIS TUP : TUP1 Family of Transcription Repressors (fungal-specific) with a proposed role in chromatin remodeling VEF : VEF Family (VRN2, EMF2, FIS2) VIM : Variant in Methylation VPGA : Flowering control-associated proteins (VRN1 homologs) VPGB : Flowering control-associated proteins (VIN3 homologs) YDG : Yeats Domain Proteins    GAS41    SAS5    YEATS2 Group    Yeast YAF9 Group

3. Select protein domain from the box

pfam smart 7tm_1 A1pp A_deamin AAA ABC_membrane ABC_tran Abhydrolase_1 Abhydrolase_3 Abhydrolase_6 ACBP Acetyltransf_1 Actin Acyl_CoA_thio Acyltransferase Aldo_ket_red Amino_oxidase AMP-binding Ank Anti-silence AP2 APH ARID ASF1_hist_chap AT_hook ATG16 Auxin_resp AXH B3 BAH Barren BRCT BRE1 Bromo_TP Bromodomain BTB bZIP_1 C1_1 Cadherin CBF CBFD_NFYB_HMF CCT CDC73 CH CHDCT2 CHDNT Chromo Chromo_shadow CHZ cNMP_binding Collagen CPSF_A CPSF_A CRC_subunit Creb_binding CTNNB1_binding Cullin CXC Cyclase DDT DEAD DEK_C DLH DMAP1 DMAP_binding DNA_methylase DNA_mis_repair DnaJ DOT1 DSBA dsrm dsRNA_bind DUF1086 DUF1087 DUF1278 DUF1423 DUF1546 DUF1605 DUF1640 DUF1777 DUF1785 DUF218 DUF572 DUF59 DUF592 DUF902 DUF906 DZF E_Pc_C ECH efhand eIF2_C Elf1 ELM2 EMP24_GP25L ERCC4 ETC_C1_NDUFA5 Exonuc_X-T F-box FKBP_C FLO_LFY fn3 Frigida FYRC FYRN GAGA Gal_Lectin GATA Gly-rich_Ago1 Glyco_hydro_1 Glyco_hydro_72 Glycos_transf_1 Glycos_transf_2 GRP GTP_EFTU GTP_EFTU_D2 GYF HA2 HAND HARP HATPase_c HDAC_interact HEAT Helicase_C HHH HhH-GPD Hira HIRAN Hist_deacetyl Histone HMG_box HNH HSA HSP20 IMS IQ JmjC JmjN K-box Kelch_1 KIX KOW Ku Ku_C Ku_N Lectin_C Leo1 Linker_histone LisH Macro MBD Med29 Methyltransf_11 Methyltransf_12 MFS_1 MORN MOZ_SAS MRG MTS Myb_DNA-binding NAF NAF NAF NAP NB-ARC NFA Nop10p Not1 Nucleoplasmin NUDIX OGG_N OS-D Oxysterol_BP PAD PAD_M PAD_N PADR1 Paf1 PAH PALP PARP PARP_reg PAZ PBP PCAF_N Peptidase_C2 Peptidase_M24 PH PHD PI3_PI4_kinase Piwi Pkinase Pkinase_Tyr PLU-1 Plus-3 PPR PQQ Pre-SET PRMT5 PWWP QLQ Rad21_Rec8 Rad21_Rec8_N Rad54_N Radical_SAM Ras RB_A RB_B Rb_C RBB1NT RdRP ResIII Retrotrans_gag RFX_DNA_binding Ribonuclease_3 Ribosomal_L7Ae Ribosomal_L7Ae RIO1 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_5 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RRM_1 Rtt106 Rubis-subs-bind rve RVP_2 RVT_1 RVT_2 S1 SAM_1 SAND SAP SAP18 Sec1 Sec7 SET SH2 SIR2 SLIDE SMC_hinge SMC_N SNF2_assoc SNF2_N SNF5 Sp100 SPK SPRY SPT16 SPT2 Spt4 Spt5-NGN Spt5_N SRF-TF SRI SRI_2 SSrecog SUI1 Supt5 Swi5 SWIB SWIM SWIRM TAF TAF4 TAF8_C TBP TBP-binding TCH TFIID_90kDa THAP TIP49 TPR_1 TPR_2 TTL Tup_N UBA ubiquitin UPF0020 UQ_con UvdE UVR VEFS-Box WAC_Acf1_DNA_bd WD40 WGR WRC WW XS YDG_SRA YEATS z-alpha zf-B_box zf-C2H2 zf-C2HC zf-C3HC4 zf-C5HC2 zf-CCCH zf-CCHC zf-CW zf-CXXC zf-GRF zf-H2C2 zf-HIT zf-MYND zf-PARP zf-TAZ zf-Tim10_DDP zf-UBP zf-XS ZZ

Optional: Include extra amino acids flanking the domain

0 5 10 15 20 50 100 200 250 300 350 300 400 500 both 5' 3'

Acknowledgements: ChromDB was funded by a grant from the National Science Foundation Plant Genome Research Project(#DBI-0421679; PI Napoli). ChromDB is funded currently by a Mexican grant to R. Jorgensen via the Consejo Nacional de Ciencia y Tecnología (Conacyt). ChromDB server is hosted by the Biotechnology Computing Facility at the University of Arizona.
Design by Western Sky Communications