II. Report Utilities
A. ChromDB Contents:
This utility provides the means to generate a list of genes/proteins in the database.
1. Option 1: View all proteins
The number in parentheses after "All Proteins" indicates the total number available for viewing and is a link to generate a list of database contents. The "All" selection can take minutes to load. The output includes the ChromDB IDs and formal names and provides a means for filtering the output by groups of organisms.
Note: The speed of the retrieval process can be hastened by selecting subgroups or individual protein groups using Option 2.
2. Option 2: View proteins of functionally related proteins
If there is a plus sign to the left of "All Proteins", click on the sign to open the functional groups. To understand the groupings, click on the plus signs to see the contents of each group; the final enlargement of a group contains the name and a short description of a ChromDB protein group. The number at the end of each subgroup shows the number of genes/proteins in this group and is a link to generate an output. Please click on the plus signs to view individual protein groups comprising each general classification.
3. Organism filter:
The top of the output page provides the means to filter the results by groups of organism. The organism comprising each group can be viewed by clicking on the taxon group.
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